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Preheat the oven to 200°C.
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Remove the skin from the pork shoulder (at most butchers this is already done for you, or you can ask). Combine 2 tablespoons of the olive oil with the cumin, paprika and oregano in a small container. Rub spice mix over all sides of the pork.
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Heat the third tablespoon of olive oil in a heavy based casserole pot over a medium heat. Add the pork and sear on all sides until just brown, adding a little more oil if it starts to stick. Add the chipotle sauce, brown sugar, minced garlic, apple cider, vinegar and chicken stock. Bring to the boil.
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Place the casserole dish in the oven for 20 minutes at 200°C. Remove from the oven and baste the meat. If the liquid level is no longer covering at least 1/3 of the meat, add a little water.
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Reduce the heat to 160°C and place the lid on the casserole dish. Continue to cook for 3 hours, until the meat is tender and falling apart. Baste every 45 minutes or so with the juices. This cooking time will differ depending on the size of your pork, and whether it is on the bone or not. Mine was 1.2kg and boneless, and took 2.5-3 hours.
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Remove from the oven.
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Remove the pork from the pot and gently shred with 2 forks, discarding any excess fat. Meanwhile, if you feel you have a lot of liquid left, gently simmer the juices to reduce. Return the pork to the pot and combine with the cooking liquid. Set aside.